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Ceballos S, Kandel M, Sridharan S, Majeed H, Monroy F, Popescu G. 2015. Active intracellular transport in metastatic cells studied by spatial light interference microscopy. Journal of Biomedical Optics. 20(11):111209.

Anwar MSabieh, Majeed H, Shaheen A. 2015. Analyzing combinations of circular birefringence, linear birefringence, and elliptical dichroism in magneto-optical rotators. Journal of Modern Optics. 62(1):75-84.

Zhan M, Crane MM, Entchev EV, Caballero A, de Abreu DAndrea Fer, Ch’ng QL, Lu H.  2015.  Automated Processing of Imaging Data through Multi-tiered Classification of Biological Structures Illustrated Using Caenorhabditis elegans.. PLoS Comput Biol. 11(4):e1004194.

He L, Kniss A, San-Miguel A, Rouse T, Kemp M, Lu H.  2015.  An automated programmable platform enabling multiplex dynamic stimuli delivery and cellular response monitoring for high-throughput suspension single-cell signaling studies. Lab Chip. 15(6):1497-1507.

Kang SK, Hwang SW, Yu S, Seo JH, Corbin EA, Shin J, Wie DSeung, Bashir R, Ma Z, Rogers JA. 2015. Biodegradable Thin Metal Foils and Spin-On Glass Materials for Transient Electronics. Advanced Functional Materials. 25(12):1789-1797.

Lee MK, Rich MH, Lee J, Kong H. 2015. A bio-inspired, microchanneled hydrogel with controlled spacing of cell adhesion ligands regulates 3D spatial organization of cells and tissue.. Biomaterials. 58:26-34.

Lee MKyung, Rich MH, Baek K, Lee J, Kong H.  2015.  Bioinspired Tuning of Hydrogel Permeability-Rigidity Dependency for 3D Cell Culture. Scientific Reports. 5:8948.

Corbin EA, Kong F, Lim CT, King WP, Bashir R. 2015. Biophysical properties of human breast cancer cells measured using silicon MEMS resonators and atomic force microscopy.. Lab Chip. 15(3):839-47.

Anand SV, M Ali Y, Saif T. 2015. Cell culture on microfabricated one-dimensional polymeric structures for bio-actuator and bio-bot applications. Lab Chip. 15(8):1879-1888.

Anand S, M Ali Y, Saif T. 2015. Cell culture on microfabricated one-dimensional polymeric structures for bio-actuator and bio-bot applications. Lab on a Chip. 15(8)

Kim MC, Whisler J, Silberberg YR, Kamm RD, H Asada H. 2015. Cell Invasion Dynamics into a Three Dimensional Extracellular Matrix Fibre Network.. PLoS Comput Biol. 11(10):e1004535.

Mir M, Kim T, Majumder A, Xiang M, Wang R, S Liu C, Gillette MU, Stice S, Popescu G.  2015.  Corrigendum: Label-Free Characterization of Emerging Human Neuronal Networks.. Sci Rep. 5:11311.

Cambria E, Renggli K, Ahrens CC, Cook CD, Kroll C, Krueger AT, Imperiali B, Griffith LG.  2015.  Covalent Modification of Synthetic Hydrogels with Bioactive Proteins via Sortase-Mediated Ligation.. Biomacromolecules. 16(8):2316-26.

Shittu I, Zhu Z, Lu Y, Hutcheson JM, Stice SL, West FD, Donadeu M, Dungu B, Fadlyf AM, Zavala G et al. 2015. Development, characterization and optimization of a new suspension chicken-induced pluripotent cell line for the production of Newcastle disease vaccine. Biologials. 44(1):24-32.

Jain A.  2015.  Development of microfluidic devices for the manipulation of neuronal synapses. Microfluidic and Compartmentalized Platforms for Neurobiological Research. :127-136.

Jain A.  2015.  Development of Microfluidic Devices for the Manipulation of Neuronal Synapses. Microfluidic and Compartmentalized Platforms for Neurobiological Research. :127-136.

Kim H, Han JW, Lee JY, Choi YJ, Sohn YD, Song M, Yoon YS.  2015.  Diabetic Mesenchymal Stem Cells Are Ineffective for Improving Limb Ischemia Due to Their Impaired Angiogenic Capability.. Cell Transplant. 24(8):1571-84.

Majeed H, Kandel M, Han K, Luo Z, Macias V, Tangella K, Balla A, Popescu G. 2015. Diagnosis of breast cancer biopsies using quantitative phase imaging. SPIE Photonics West: BiOS – Quantitative Phase Imaging. 9336

Wang R, Lei L, Sridharan S, Wang Y, Levine AJ, Popescu G. 2015.  Dispersion relations of cytoskeleton dynamics. Dove Medical Press. 2016:1-7.

Lim B, Dsilva CJ, Levario TJ, Lu H, Schüpbach T, Kevrekidis IG, Shvartsman SY. 2015. Dynamics of Inductive ERK Signaling in the Drosophila Embryo.. Curr Biol. 25(13):1784-90.

Pai VP, Lemire JM, Paré JF, Lin G, Chen Y, Levin M. 2015. Endogenous gradients of resting potential instructively pattern embryonic neural tissue via Notch signaling and regulation of proliferation.. J Neurosci. 35(10):4366-85.

Chien S, Bashir R, Nerem RM, Pettigrew R. 2015. Engineering as a new frontier for translational medicine.. Sci Transl Med. 7(281):281fs13.

Lee S, Valmikinathan CM, Byun J, Kim S, Lee G, Mokarram N, S Pai B, Um E, Bellamkonda RV, Yoon YS.  2015.  Enhanced therapeutic neovascularization by CD31-expressing cells and embryonic stem cell-derived endothelial cells engineered with chitosan hydrogel containing VEGF-releasing microtubes.. Biomaterials. 63:158-67.

Chan V, Neal D, Uzel SGM, Kim H, Bashir R, Asada HH. 2015. Fabrication and characterization of optogenetic, multi-strip cardiac muscles. Lab Chip. 15(10):2258-2268.

Gol EA, Bartocci E. 2015. A Formal Methods Approach to Pattern Synthesis in Reaction Diffusion Systems. 53rd IEEE Conference on Decision and Control (CDC), Los Angeles, CA 2014. 

Entchev EV, Patel DS, Zhan M, Steele AJ, Lu H, Ch’ng QL.  2015.  A gene-expression-based neural code for food abundance that modulates lifespan.. Elife. 4:e06259.

Lee SJ, Park C, Lee JY, Kim S, Kwon PJ, Kim W, Jeon YH, Lee E, Yoon YS. 2015. Generation of pure lymphatic endothelial cells from human pluripotent stem cells and their therapeutic effects on wound repair.. Sci Rep. 5:11019.

Lee MK, Rich MH, Shkumatov A, Jeong JH, Boppart MD, Bashir R, Gillette MU, Lee J, Kong H.  2015.  Glacier Moraine Formation-Mimicking Colloidal Particle Assembly in Microchanneled, Bioactive Hydrogel for Guided Vascular Network Construction. Advanced Healthcare Materials. 4(2):195-201.

Nguyen T, Majeed H, Edwards C, Do M, Goddard L, Popescu G.  2015.  Halo-free quantitative phase imaging with partially coherent illumination. SPIE Photonics West: BiOS – Quantitative Phase Imaging. 9336

Majeed H, Kandel M, Bhaduri B, Han K, Luo Z, Tangella K, Popescu G.  2015.  High throughput imaging of blood smears using white light diffraction phase microscopy. SPIE Photonics West: BiOS – Quantitative Phase Imaging. 9336

Chavez A, Scheiman J, Vora S, Pruitt BW, Tuttle M, Iyer EPR, Lin S, Kiani S, Guzman CD, Wiegand DJ et al. 2015. Highly efficient Cas9-mediated transcriptional programming.. Nat Methods. 12(4):326-8.

Raman R, Bhaduri B, Mir M, Shkumatov A, Lee MKyung, Popescu G, Kong H, Bashir R. 2015. High-Resolution Projection Microstereolithography for Patterning of Neovasculature. Advance Healthcare Materials. 5(5):610-619.

Belair DG, Whisler JA, Valdez J, Velazquez J, Molenda JA, Vickerman V, Lewis R, Daigh C, Hansen TD, Mann DA et al. 2015. Human vascular tissue models formed from human induced pluripotent stem cell derived endothelial cells.. Stem Cell Rev. 11(3):511-25.

Gray WD, French KM, Ghosh-Choudhary S, Maxwell JT, Brown ME, Platt MO, Searles CD, Davis ME. 2015. Identification of therapeutic covariant microRNA clusters in hypoxia-treated cardiac progenitor cell exosomes using systems biology.. Circ Res. 116(2):255-63.

Baek K, Liang J, Lim WT, Zhao H, Kim DHyun, Kong H. 2015.  In Situ Assembly of Antifouling/Bacterial Silver Nanoparticle-Hydrogel Composites with Controlled Particle Release and Matrix Softening. ACS Applied Materials & Interfaces. 7(28):15359-15367.

Baek K, Clay N, Qin EC, Sullivan KM, Kim DHyun, Kong H. 2015. In situ assembly of the collagen–polyacrylamide interpenetrating network hydrogel: Enabling decoupled control of stiffness and degree of swelling. European Polymer Journal. 

Lobo D, Levin M. 2015. Inferring regulatory networks from experimental morphological phenotypes: a computational method reverse-engineers planarian regeneration.. PLoS Comput Biol. 11(6):e1004295.

Levario TJ, Zhao C, Rouse T, Shvartsman SY, Lu H.  2015.  An integrated platform for large-scale data collection and precise perturbation of live Drosophila embryos. Nature Research Journal. 6:21366.

Kundaje A, Meuleman W, Ernst J, Bilenky M, Yen A, Heravi-Moussavi A, Kheradpour P, Zhang Z, Wang J, Ziller MJ et al.  2015.  Integrative analysis of 111 reference human epigenomes.. Nature. 518(7539):317-30.

Rizki G, Boyer LA.  2015.  Lncing epigenetic control of transcription to cardiovascular development and disease.. Circ Res. 117(2):192-206.

Pai VP, Lemire JM, Chen Y, Lin G, Levin M.  2015.  Local and long-range endogenous resting potential gradients antagonistically regulate apoptosis and proliferation in the embryonic CNS. The International Journal of Developmental Biology. 59(7-8-9):327-340.

Pai VP, Lemire JM, Chen Y, Lin G, Levin M. 2015. Local and long-range endogenous resting potential gradients antagonistically regulate apoptosis and proliferation in the embryonic CNS.. Int J Dev Biol. 59(7-9):327-40.

Shkumatov A, Thompson M, Choi KM, Sicard D, Baek K, Kim DHyun, Tschumperlin DJ, Prakash YS, Kong H. 2015. Matrix stiffness-modulated proliferation and secretory function of the airway smooth muscle cells.. Am J Physiol Lung Cell Mol Physiol. 308(11):L1125-35.

Neal D, Sakar MS, Bashir R, Chan V, Asada HH. 2015. Mechanical Characterization and Shape Optimization of Fascicle-Like 3D Skeletal Muscle Tissues Contracted with Electrical and Optical Stimuli. Tissue Engineering Part A. 21(11-12):1848-1858.

Neal D, Sakar MSelman, Bashir R, Chan V, Asada HH.  2015.  Mechanical Characterization and Shape Optimization of Fascicle-Like 3D Skeletal Muscle Tissues Contracted with Electrical and Optical Stimuli.. Tissue Eng Part A. 21(11-12):1848-58.

Baek K, Clay N, Qin E, Sullivan K, Kong H. 2015. mIn situ assembly of the collagen-polyacrylamide interpenetrating network hydrogel: Enabling decoupled control of stiffness and degree of swelling. European Polymer Journal. 

Li Y., Jiang Y., Chen H., Liao W., Weiss R, Xie Z.  2015.  Modular construction of mammalian gene circuits using TALE transcriptional repressors. Nature Chemical Biology. (February 2, 2015)

Park K, Mehrnezhad A, Corbin EA, Bashir R. 2015. Optomechanical measurement of the stiffness of single adherent cells.. Lab Chip. 15(17):3460-4.

Neiman JAShepard, Raman R, Chan V, Rhoads MG, Raredon MSam B, Velazquez JJ, Dyer RL, Bashir R, Hammond PT, Griffith LG. 2015.  Photopatterning of hydrogel scaffolds coupled to filter materials using stereolithography for perfused 3D culture of hepatocytes.. Biotechnol Bioeng. 112(4):777-87.

Neiman JAShepard, Raman R, Chan V, Rhoads MG, Raredon MSam B, Velazquez JJ, Dyer RL, Bashir R, Hammond PT, Griffith LG.  2015.  Photopatterning of Hydrogel Scaffolds Coupled to Filter Materials Using Stereolithography for Perfused 3D Culture of Hepatocytes. Biotechnology and Bioengineering. 112(4):777-787.

Gallegos-Cárdenas A, Webb R, Jordan E, West R, West FD, Yang J-Y, Wang K, Stice SL. 2015. Pig Induced Pluripotent Stem Cell-Derived Neural Rosettes Developmentally Mimic Human Pluripotent Stem Cell Neural Differentiation.. Stem Cells Dev. 24(16):1901-11.

Sridharan S, Macias V, Tangella K, Kajdacsy-Balla A, Popescu G. 2015.  Prediction of prostate cancer recurrence using quantitative phase imaging.. Sci Rep. 5:9976.

Sridharan S, Macias V, Tangella K, Kajdacsy-Balla é, Popescu G.  2015.  Prediction of Prostate Cancer Recurrence Using Quantitative Phase Imaging. Scientific Reports. 5:9976.

Mallis RJ, Bai K, Arthanari H, Hussey RE, Handley M, Li Z, Chingozha L, Duke-Cohan JS, Lu H, Wang JH et al. 2015. Pre-TCR ligand binding impacts thymocyte development before αβTCR expression.. Proc Natl Acad Sci U S A. 112(27):8373-8.

White DE, Sylvester JB, Levario TJ, Lu H, J Streelman T, McDevitt TC, Kemp ML.  2015.  Quantitative multivariate analysis of dynamic multicellular morphogenic trajectories.. Integr Biol (Camb). 7(7):825-33.

Sridharan S, Katz A, Soto-Adames F, Popescu G.  2015.  Quantitative phase imaging of arthropods.. J Biomed Opt. 20(11):111212.

Alberts B, Cicerone RJ, Fienberg SE, Kamb A, McNutt M, Nerem RM, Schekman R, Shiffrin R, Stodden V, Suresh S et al.  2015.  SCIENTIFIC INTEGRITY. Self-correction in science at work.. Science. 348(6242):1420-2.

Haghighi I, Jones A.  2015.  SpaTeL: A Novel Spatial-Temporal Logic and Its Applications to Networked Systems. Hybrid Systems: Computation and Control. 

Dsilva CJ, Lim B, Lu H, Singer A, Kevrekidis IG, Shvartsman SY.  2015.  Temporal ordering and registration of images in studies of developmental dynamics.. Development. 142(9):1717-24.

O’Meara CC, Wamstad JA, Gladstone RA, Fomovsky GM, Butty VL, Shrikumar A, Gannon JB, Boyer LA, Lee RT. 2015. Transcriptional reversion of cardiac myocyte fate during mammalian cardiac regeneration.. Circ Res. 116(5):804-15.

Shaheen A, Majeed H, Anwar MSabieh. 2015. Ultralarge magneto-optic rotations and rotary dispersion in terbium gallium garnet single crystal. Applied Optics. 54(17):5549.

Ahrens CC, M Welch E, Griffith LG, Hammond PT. 2015. Uncharged Helical Modular Polypeptide Hydrogels for Cellular Scaffolds.. Biomacromolecules. 16(12):3774-83.

Ju L, Chen Y, Zhou F, Lu H, Cruz MA, Zhu C.  2015.  Von Willebrand factor-A1 domain binds platelet glycoprotein Ibα in multiple states with distinctive force-dependent dissociation kinetics.. Thromb Res. 136(3):606-12.

Rich MH, Lee MKyung, Marshall N, Clay N, Chen J, Mahmassani Z, Boppart M, Kong H. 2015  Water–Hydrogel Binding Affinity Modulates Freeze-Drying-Induced Micropore Architecture and Skeletal Myotube Formation. Biomacromolecules. 16(8):2255-2264.